DATASET
Classic Dataset
IXI Dataset
The IXI dataset contains nearly 600 MRI scans from healthy volunteers, including T1‑weighted, T2‑weighted, PD‑weighted, MRA, and diffusion‑weighted images. The scans were acquired using different scanner systems at Hammersmith Hospital, Guy’s Hospital, and the Institute of Psychiatry.
Updated 1/12/2024
github
Description
Dataset Overview
Dataset Name
- Preprocessed IXI Dataset
Dataset Description
- Contains nearly 600 MR images from healthy volunteers.
Acquisition Protocol
- Includes T1, T2, PD‑weighted images, MRA images, and 15‑direction diffusion‑weighted images.
Scan Sites
- Hammersmith Hospital using Philips 3T system
- Guy’s Hospital using Philips 1.5T system
- Institute of Psychiatry using GE 1.5T system
Dataset Reference
- The dataset is licensed under Creative Commons CC BY‑SA 3.0.
- For more details and download, see the IXI project official website.
Preprocessing Steps
Data Used
- T1 MRI data
Preprocessing Procedure
- AC‑PC Realignment
- GM, WM Tissue Segmentation
- Non‑linear registration to MNI152 space
- Normalization
- Resampling
- Modulation
- 4 mm Smoothing
Preprocessing Results
- Generated standardized brain volume maps of size 121 × 145 × 121, each voxel representing tissue volume.
Software Environment
- Preprocessed with SPM12 in MATLAB R2018a.
- DARTEL used for normalization, non‑linear registration, resampling, modulation, and smoothing.
Preprocessing Reference
- Follows the paper by James H. Cole et al. "Predicting brain age with deep learning from raw imaging data results in a reliable and heritable biomarker".
- Detailed preprocessing tutorial: Voxel‑based Morphometry (VBM) tutorial.
Download Information
- The dataset can be accessed via the temporary link.
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Topics
Medical Imaging
Health Research
Source
Organization: github
Created: 9/12/2018
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