coconatfly

Dataset Overview

Dataset Name: coconatfly

Purpose: Support comparative/combinatorial connectomics analysis across Drosophila datasets.

Features:

• Provides a unified interface and functions for convenient access and analysis of connectome information from different Drosophila datasets.
• Built on top of the coconat package, focusing on analysis needs specific to Drosophila datasets.

Supported Datasets:

1. Janelia hemibrain (hemibrain)
2. Female Adult Fly Brain – FlyWire connectome (flywire)
3. Janelia male Ventral Nerve Cord (manc)
4. Wei Lee, John Tuthill and colleagues – Female Adult Nerve Cord (fanc)
5. Janelia Male CNS (malecns)
6. Janelia Male Optic Lobe (part of the malecns) (opticlobe)

Status: Experimental; interface may change.

Installation:

• Install with natmanager.
• Some datasets may require authentication.

Usage Example:

• Example code demonstrates how to load the library, query specific neuron information, and obtain neuron connectivity.

Documentation:

• Detailed user manual and tutorials are available at natverse.org/coconatfly.

Citation:

• When using the dataset, cite the relevant literature, including the development papers for natverse and coconatfly.

Funding:

• Supported by the NIH BRAIN Initiative, NSF/MRC Neuronex2, and the Medical Research Council.