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BOLD5000

The BOLD5000 dataset contains image data of brains, objects, and landscapes for functional task acquisition, including MRI and fMRI data from multiple participants. The dataset records detailed scene data, anatomical data, and preprocessing steps for each functional scan.

Updated 3/24/2022
github

Description

Dataset Overview

Dataset Name

BOLD5000: Brains, Objects, Landscapes Dataset

Participant Information

  • Four participants: CSI1, CSI2, CSI3, & CSI4
  • Functional task acquisition sessions: total of 15 sessions (#1-15)
  • Anatomical data acquisition session: #16

Data Content

  • Functional session data:
    • Three sets of field maps (EPI opposite phase encoding; spin‑echo opposite phase encoding pairs, including partial and non‑partial Fourier)
    • 9 or 10 functional scans covering 5,000 scene data (5000scenes)
    • 1 or 0 functional localizer scans for defining scene‑selective regions (localizer)
    • Each event.json file lists each stimulus, stimulus onset time, and participant response (participants performed a simple affective task)
  • Anatomical data:
    • T1‑weighted MPRAGE scans
    • T2‑weighted SPACE scans
    • Diffusion spectrum imaging

Data Processing

  • Preprocessing: All functional data were preprocessed using fMRIprep, including motion correction, susceptibility distortion correction, and alignment to anatomical data.
  • Derived data directory contents:
    • fMRIprep: preprocessed data and reports
    • Freesurfer: reconstruction results after fMRIprep preprocessing
    • MRIQC: image quality metrics (IQM) obtained using MRIQC
    • spm: directory containing masks used to define regions of interest (ROI) for each participant

Special Notes

  • All MRI and fMRI data are provided after Siemens pre‑scan normalization filter processing.
  • CSI4 participated in only 10 MRI sessions; sessions 1‑9 were functional acquisition sessions, and session 10 was an anatomical data acquisition session.

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Topics

Neuroimaging
Functional Magnetic Resonance Imaging

Source

Organization: github

Created: 9/12/2018

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