Dataset Overview

Basic Information

• License: Unknown
• Task Type: Image Segmentation
• Tags: Medical
• Friendly Name: AbdomenAtlas 1.0 Mini
• Size Category: 1K < n < 10K

Dataset Description

• Summary: Contains 5,195 annotated CT volumes with labels for spleen, liver, kidney, stomach, gallbladder, pancreas, aorta, and inferior vena cava.

Download Guide

pip install -U "huggingface_hub[cli]"

mkdir AbdomenAtlas
cd AbdomenAtlas
huggingface-cli download AbdomenAtlas/AbdomenAtlas1.0Mini --repo-type dataset --local-dir . --cache-dir ./cache

# Optional resume
huggingface-cli download AbdomenAtlas/AbdomenAtlas1.0Mini --repo-type dataset --local-dir . --cache-dir ./cache --resume-download

Related Papers

• AbdomenAtlas‑8K: Annotating 8,000 CT Volumes for Multi‑Organ Segmentation in Three Weeks

  • Authors: Chongyu Qu, Tiezheng Zhang, Hualin Qiao, Jie Liu, Yucheng Tang, Alan L. Yuille, Zongwei Zhou
  • Institutions: Johns Hopkins University, Rutgers University, City University of Hong Kong, NVIDIA
  • Conference: NeurIPS 2023
  • Links: paper | code | dataset | annotation | poster

• AbdomenAtlas‑8K: Human‑in‑the‑Loop Annotating Eight Anatomical Structures for 8,448 Three‑Dimensional CT Volumes in Three Weeks

  • Authors: Chongyu Qu, Tiezheng Zhang, Hualin Qiao, Jie Liu, Yucheng Tang, Alan L. Yuille, Zongwei Zhou
  • Institutions: Johns Hopkins University, Rutgers University, City University of Hong Kong, NVIDIA
  • Conference: RSNA 2023 (Oral Presentation)
  • Links: paper | code | slides

Citation

@article{qu2023abdomenatlas,
  title={Abdomenatlas‑8k: Annotating 8,000 CT volumes for multi‑organ segmentation in three weeks},
  author={Qu, Chongyu and Zhang, Tiezheng and Qiao, Hualin and Tang, Yucheng and Yuille, Alan L and Zhou, Zongwei},
  journal={Advances in Neural Information Processing Systems},
  volume={36},
  year={2023}
}